node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cj0459c | Cj0681 | Cj0459c | Cj0681 | Hypothetical protein Cj0459c; Original (2000) note: Cj0459c, unknown, len: 88 aa; 32.5% identical to HP0268. Functional classification -Conserved hypothetical proteins. | Hypothetical protein Cj0681; Original (2000) note: Cj0681, unknown, len: 76 aa; 36.2% identity to HP0385. Functional classification -Conserved hypothetical proteins. | 0.417 |
Cj0681 | Cj0459c | Cj0681 | Cj0459c | Hypothetical protein Cj0681; Original (2000) note: Cj0681, unknown, len: 76 aa; 36.2% identity to HP0385. Functional classification -Conserved hypothetical proteins. | Hypothetical protein Cj0459c; Original (2000) note: Cj0459c, unknown, len: 88 aa; 32.5% identical to HP0268. Functional classification -Conserved hypothetical proteins. | 0.417 |
Cj0681 | Cj0682 | Cj0681 | Cj0682 | Hypothetical protein Cj0681; Original (2000) note: Cj0681, unknown, len: 76 aa; 36.2% identity to HP0385. Functional classification -Conserved hypothetical proteins. | Hypothetical protein Cj0682; Original (2000) note: Cj0682, unknown, len: 80 aa; no Hp match. Functional classification - Unknown. | 0.878 |
Cj0681 | Cj0683 | Cj0681 | Cj0683 | Hypothetical protein Cj0681; Original (2000) note: Cj0681, unknown, len: 76 aa; 36.2% identity to HP0385. Functional classification -Conserved hypothetical proteins. | Putative periplasmic protein; Original (2000) note: Cj0683, probable periplasmic protein, len: 145 aa; no Hp match; Updated (2006) note: One probable transmembrane helices predicted by TMHMM2.0. Further support for product function. Pfam domain PF07963 Prokaryotic N-terminal methylation motif was identified within CDS. The motif is involved in methylation and is said to be found at the N-terminus of pilins and other proteins involved in secretion. Functional classification - Miscellaneous periplasmic proteins. | 0.799 |
Cj0681 | priA | Cj0681 | Cj0684 | Hypothetical protein Cj0681; Original (2000) note: Cj0681, unknown, len: 76 aa; 36.2% identity to HP0385. Functional classification -Conserved hypothetical proteins. | Putative primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.799 |
Cj0681 | uvrB | Cj0681 | Cj0680c | Hypothetical protein Cj0681; Original (2000) note: Cj0681, unknown, len: 76 aa; 36.2% identity to HP0385. Functional classification -Conserved hypothetical proteins. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.578 |
Cj0682 | Cj0681 | Cj0682 | Cj0681 | Hypothetical protein Cj0682; Original (2000) note: Cj0682, unknown, len: 80 aa; no Hp match. Functional classification - Unknown. | Hypothetical protein Cj0681; Original (2000) note: Cj0681, unknown, len: 76 aa; 36.2% identity to HP0385. Functional classification -Conserved hypothetical proteins. | 0.878 |
Cj0682 | Cj0683 | Cj0682 | Cj0683 | Hypothetical protein Cj0682; Original (2000) note: Cj0682, unknown, len: 80 aa; no Hp match. Functional classification - Unknown. | Putative periplasmic protein; Original (2000) note: Cj0683, probable periplasmic protein, len: 145 aa; no Hp match; Updated (2006) note: One probable transmembrane helices predicted by TMHMM2.0. Further support for product function. Pfam domain PF07963 Prokaryotic N-terminal methylation motif was identified within CDS. The motif is involved in methylation and is said to be found at the N-terminus of pilins and other proteins involved in secretion. Functional classification - Miscellaneous periplasmic proteins. | 0.802 |
Cj0682 | priA | Cj0682 | Cj0684 | Hypothetical protein Cj0682; Original (2000) note: Cj0682, unknown, len: 80 aa; no Hp match. Functional classification - Unknown. | Putative primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.799 |
Cj0682 | uvrB | Cj0682 | Cj0680c | Hypothetical protein Cj0682; Original (2000) note: Cj0682, unknown, len: 80 aa; no Hp match. Functional classification - Unknown. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.558 |
Cj0683 | Cj0681 | Cj0683 | Cj0681 | Putative periplasmic protein; Original (2000) note: Cj0683, probable periplasmic protein, len: 145 aa; no Hp match; Updated (2006) note: One probable transmembrane helices predicted by TMHMM2.0. Further support for product function. Pfam domain PF07963 Prokaryotic N-terminal methylation motif was identified within CDS. The motif is involved in methylation and is said to be found at the N-terminus of pilins and other proteins involved in secretion. Functional classification - Miscellaneous periplasmic proteins. | Hypothetical protein Cj0681; Original (2000) note: Cj0681, unknown, len: 76 aa; 36.2% identity to HP0385. Functional classification -Conserved hypothetical proteins. | 0.799 |
Cj0683 | Cj0682 | Cj0683 | Cj0682 | Putative periplasmic protein; Original (2000) note: Cj0683, probable periplasmic protein, len: 145 aa; no Hp match; Updated (2006) note: One probable transmembrane helices predicted by TMHMM2.0. Further support for product function. Pfam domain PF07963 Prokaryotic N-terminal methylation motif was identified within CDS. The motif is involved in methylation and is said to be found at the N-terminus of pilins and other proteins involved in secretion. Functional classification - Miscellaneous periplasmic proteins. | Hypothetical protein Cj0682; Original (2000) note: Cj0682, unknown, len: 80 aa; no Hp match. Functional classification - Unknown. | 0.802 |
Cj0683 | priA | Cj0683 | Cj0684 | Putative periplasmic protein; Original (2000) note: Cj0683, probable periplasmic protein, len: 145 aa; no Hp match; Updated (2006) note: One probable transmembrane helices predicted by TMHMM2.0. Further support for product function. Pfam domain PF07963 Prokaryotic N-terminal methylation motif was identified within CDS. The motif is involved in methylation and is said to be found at the N-terminus of pilins and other proteins involved in secretion. Functional classification - Miscellaneous periplasmic proteins. | Putative primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.799 |
Cj0683 | uvrB | Cj0683 | Cj0680c | Putative periplasmic protein; Original (2000) note: Cj0683, probable periplasmic protein, len: 145 aa; no Hp match; Updated (2006) note: One probable transmembrane helices predicted by TMHMM2.0. Further support for product function. Pfam domain PF07963 Prokaryotic N-terminal methylation motif was identified within CDS. The motif is involved in methylation and is said to be found at the N-terminus of pilins and other proteins involved in secretion. Functional classification - Miscellaneous periplasmic proteins. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.578 |
priA | Cj0681 | Cj0684 | Cj0681 | Putative primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | Hypothetical protein Cj0681; Original (2000) note: Cj0681, unknown, len: 76 aa; 36.2% identity to HP0385. Functional classification -Conserved hypothetical proteins. | 0.799 |
priA | Cj0682 | Cj0684 | Cj0682 | Putative primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | Hypothetical protein Cj0682; Original (2000) note: Cj0682, unknown, len: 80 aa; no Hp match. Functional classification - Unknown. | 0.799 |
priA | Cj0683 | Cj0684 | Cj0683 | Putative primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | Putative periplasmic protein; Original (2000) note: Cj0683, probable periplasmic protein, len: 145 aa; no Hp match; Updated (2006) note: One probable transmembrane helices predicted by TMHMM2.0. Further support for product function. Pfam domain PF07963 Prokaryotic N-terminal methylation motif was identified within CDS. The motif is involved in methylation and is said to be found at the N-terminus of pilins and other proteins involved in secretion. Functional classification - Miscellaneous periplasmic proteins. | 0.799 |
priA | uvrB | Cj0684 | Cj0680c | Putative primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.631 |
uvrB | Cj0681 | Cj0680c | Cj0681 | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | Hypothetical protein Cj0681; Original (2000) note: Cj0681, unknown, len: 76 aa; 36.2% identity to HP0385. Functional classification -Conserved hypothetical proteins. | 0.578 |
uvrB | Cj0682 | Cj0680c | Cj0682 | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | Hypothetical protein Cj0682; Original (2000) note: Cj0682, unknown, len: 80 aa; no Hp match. Functional classification - Unknown. | 0.558 |