node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cj0957c | Cj0959c | Cj0957c | Cj0959c | Hypothetical protein Cj0957c; Original (2000) note: Cj0957c, unknown, len: 272 aa; 42.5% identity to HP1451. Functional classification -Conserved hypothetical proteins. | Conserved hypothetical protein Cj0959c; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.921 |
Cj0957c | rnpA | Cj0957c | Cj0960c | Hypothetical protein Cj0957c; Original (2000) note: Cj0957c, unknown, len: 272 aa; 42.5% identity to HP1451. Functional classification -Conserved hypothetical proteins. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.923 |
Cj0957c | rpmH | Cj0957c | Cj0961c | Hypothetical protein Cj0957c; Original (2000) note: Cj0957c, unknown, len: 272 aa; 42.5% identity to HP1451. Functional classification -Conserved hypothetical proteins. | Original (2000) note: Cj0961c, rpmH, 50S ribosomal protein L34, len: 44 aa; highly similar to many e.g. RL34_ECOLI 50S ribosomal protein L34 (46 aa), fasta scores; opt: 196 z-score: 321.0 E(): 1.4e-10, 65.9% identity in 44 aa overlap. 90.9% identity to HP1447. Contains PS00784 Ribosomal protein L34 signature, and Pfam match to entry PF00468 L34, Ribosomal protein L34; Updated (2006) note: Characterised in Escherichia coli with acceptable identity score, so putative not added to product function. Functional classification - Ribosomal protein synthesis and modification; PMID:6329723. | 0.849 |
Cj0957c | secG | Cj0957c | Cj0235c | Hypothetical protein Cj0957c; Original (2000) note: Cj0957c, unknown, len: 272 aa; 42.5% identity to HP1451. Functional classification -Conserved hypothetical proteins. | Putative protein-export membrane protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.626 |
Cj0957c | yidC | Cj0957c | Cj0958c | Hypothetical protein Cj0957c; Original (2000) note: Cj0957c, unknown, len: 272 aa; 42.5% identity to HP1451. Functional classification -Conserved hypothetical proteins. | Putative membrane protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.947 |
Cj0959c | Cj0957c | Cj0959c | Cj0957c | Conserved hypothetical protein Cj0959c; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Hypothetical protein Cj0957c; Original (2000) note: Cj0957c, unknown, len: 272 aa; 42.5% identity to HP1451. Functional classification -Conserved hypothetical proteins. | 0.921 |
Cj0959c | rnpA | Cj0959c | Cj0960c | Conserved hypothetical protein Cj0959c; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.987 |
Cj0959c | rpmH | Cj0959c | Cj0961c | Conserved hypothetical protein Cj0959c; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Original (2000) note: Cj0961c, rpmH, 50S ribosomal protein L34, len: 44 aa; highly similar to many e.g. RL34_ECOLI 50S ribosomal protein L34 (46 aa), fasta scores; opt: 196 z-score: 321.0 E(): 1.4e-10, 65.9% identity in 44 aa overlap. 90.9% identity to HP1447. Contains PS00784 Ribosomal protein L34 signature, and Pfam match to entry PF00468 L34, Ribosomal protein L34; Updated (2006) note: Characterised in Escherichia coli with acceptable identity score, so putative not added to product function. Functional classification - Ribosomal protein synthesis and modification; PMID:6329723. | 0.866 |
Cj0959c | secE | Cj0959c | Cj0472 | Conserved hypothetical protein Cj0959c; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Preprotein translocase SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.774 |
Cj0959c | yidC | Cj0959c | Cj0958c | Conserved hypothetical protein Cj0959c; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Putative membrane protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.959 |
atpE | rpmH | Cj0936 | Cj0961c | ATP synthase F0 sector C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | Original (2000) note: Cj0961c, rpmH, 50S ribosomal protein L34, len: 44 aa; highly similar to many e.g. RL34_ECOLI 50S ribosomal protein L34 (46 aa), fasta scores; opt: 196 z-score: 321.0 E(): 1.4e-10, 65.9% identity in 44 aa overlap. 90.9% identity to HP1447. Contains PS00784 Ribosomal protein L34 signature, and Pfam match to entry PF00468 L34, Ribosomal protein L34; Updated (2006) note: Characterised in Escherichia coli with acceptable identity score, so putative not added to product function. Functional classification - Ribosomal protein synthesis and modification; PMID:6329723. | 0.409 |
atpE | secY | Cj0936 | Cj1688c | ATP synthase F0 sector C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | Preprotein translocase subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.805 |
atpE | yidC | Cj0936 | Cj0958c | ATP synthase F0 sector C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | Putative membrane protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.944 |
rnpA | Cj0957c | Cj0960c | Cj0957c | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | Hypothetical protein Cj0957c; Original (2000) note: Cj0957c, unknown, len: 272 aa; 42.5% identity to HP1451. Functional classification -Conserved hypothetical proteins. | 0.923 |
rnpA | Cj0959c | Cj0960c | Cj0959c | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | Conserved hypothetical protein Cj0959c; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.987 |
rnpA | rpmH | Cj0960c | Cj0961c | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | Original (2000) note: Cj0961c, rpmH, 50S ribosomal protein L34, len: 44 aa; highly similar to many e.g. RL34_ECOLI 50S ribosomal protein L34 (46 aa), fasta scores; opt: 196 z-score: 321.0 E(): 1.4e-10, 65.9% identity in 44 aa overlap. 90.9% identity to HP1447. Contains PS00784 Ribosomal protein L34 signature, and Pfam match to entry PF00468 L34, Ribosomal protein L34; Updated (2006) note: Characterised in Escherichia coli with acceptable identity score, so putative not added to product function. Functional classification - Ribosomal protein synthesis and modification; PMID:6329723. | 0.989 |
rnpA | secG | Cj0960c | Cj0235c | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | Putative protein-export membrane protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.606 |
rnpA | yidC | Cj0960c | Cj0958c | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | Putative membrane protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.978 |
rpmH | Cj0957c | Cj0961c | Cj0957c | Original (2000) note: Cj0961c, rpmH, 50S ribosomal protein L34, len: 44 aa; highly similar to many e.g. RL34_ECOLI 50S ribosomal protein L34 (46 aa), fasta scores; opt: 196 z-score: 321.0 E(): 1.4e-10, 65.9% identity in 44 aa overlap. 90.9% identity to HP1447. Contains PS00784 Ribosomal protein L34 signature, and Pfam match to entry PF00468 L34, Ribosomal protein L34; Updated (2006) note: Characterised in Escherichia coli with acceptable identity score, so putative not added to product function. Functional classification - Ribosomal protein synthesis and modification; PMID:6329723. | Hypothetical protein Cj0957c; Original (2000) note: Cj0957c, unknown, len: 272 aa; 42.5% identity to HP1451. Functional classification -Conserved hypothetical proteins. | 0.849 |
rpmH | Cj0959c | Cj0961c | Cj0959c | Original (2000) note: Cj0961c, rpmH, 50S ribosomal protein L34, len: 44 aa; highly similar to many e.g. RL34_ECOLI 50S ribosomal protein L34 (46 aa), fasta scores; opt: 196 z-score: 321.0 E(): 1.4e-10, 65.9% identity in 44 aa overlap. 90.9% identity to HP1447. Contains PS00784 Ribosomal protein L34 signature, and Pfam match to entry PF00468 L34, Ribosomal protein L34; Updated (2006) note: Characterised in Escherichia coli with acceptable identity score, so putative not added to product function. Functional classification - Ribosomal protein synthesis and modification; PMID:6329723. | Conserved hypothetical protein Cj0959c; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.866 |