STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctsTPutative periplasmic protein; Original (2000) note: Cj1077, probable periplasmic protein, len: 100 aa; no Hp match. Contains probable N-terminal signal sequence; Updated (2006) note: Some characterisation work carried out within Campylobacter jejuni. Product unchanged, but gene name added. Functional classification - Miscellaneous periplasmic proteins; PMID:12949093. (100 aa)    
Predicted Functional Partners:
Cj1078
Putative periplasmic protein; Original (2000) note: Cj1078, probable periplasmic protein, len: 220 aa; no Hp match. Contains probable N-terminal signal sequence and PS00572 Glycosyl hydrolases family 1 active site; Updated (2006) note: Some research carried out within Campylobacter jejuni. Product unchanged. Functional classification - Miscellaneous periplasmic proteins; PMID:12949093.
  
    0.789
Cj1079
Putative periplasmic protein; Original (2000) note: Cj1079, probable periplasmic protein, len: 150 aa; no Hp match. Contains probable N-terminal signal sequence. Functional classification -Miscellaneous periplasmic proteins.
  
    0.789
fliW
Conserved hypothetical protein Cj1075; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum (Probable). Antagonizes CsrA-mediated translational repression of flaA in a promoter-independent manner, leading to expression of FlaA and probably other flagellar genes. Binds to FlaA, which releases CsrA to repress translation of flaA mRNA. Also has a negative effect on flaA transcription, and influences the localization of flaA mRNA to the poles [...]
       0.773
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.773
bamD
Putative lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
    0.518
lon
ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
  
    0.496
Your Current Organism:
Campylobacter jejuni NCTC 11168
NCBI taxonomy Id: 192222
Other names: C. jejuni subsp. jejuni NCTC 11168 = ATCC 700819, Campylobacter jejuni subsp. jejuni ATCC 700819, Campylobacter jejuni subsp. jejuni ATCC 700819 = NCTC 11168, Campylobacter jejuni subsp. jejuni NCTC 11168, Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
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