STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLP17613.1ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (574 aa)    
Predicted Functional Partners:
OLP15984.1
Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.904
OLP18828.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.780
sbcD
Hypothetical protein; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
 
     0.772
OLP18657.1
NurA domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.595
OLP17263.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.470
OLP17498.1
DUF4327 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.425
OLP18810.1
Abortive phage infection protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.415
Your Current Organism:
Leptolyngbya sp. hensonii
NCBI taxonomy Id: 1922337
Other names: L. sp. 'hensonii', Leptolyngbya sp. 'hensonii'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.