STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQQ52646.1DUF305 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (153 aa)    
Predicted Functional Partners:
AQQ53241.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.931
AQQ53335.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.931
AQQ51956.1
Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.899
AQQ53235.1
Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.887
AQQ52642.1
Copper resistance protein CopZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.838
AQQ53233.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.838
AQQ54606.1
Cation-efflux pump; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.833
AQQ52647.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.830
B0X71_10645
Heavy metal-binding protein; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.818
AQQ53486.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.815
Your Current Organism:
Planococcus maritimus
NCBI taxonomy Id: 192421
Other names: DSM 17275, JCM 11543, KCCM 41587, P. maritimus, Planococcus maritimus Yoon et al. 2003 emend. Ivanova et al. 2006, Planococcus sp. KMM 3738, strain TF-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.