STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQQ52948.1SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)    
Predicted Functional Partners:
AQQ52947.1
Ribosome silencing factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.996
AQQ52944.1
RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.991
AQQ52946.1
Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.990
AQQ52942.1
Ribosome biogenesis GTPase YqeH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.988
nadD
Nicotinate-nucleotide adenylyltransferase; Transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.986
AQQ52943.1
Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.982
AQQ52941.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.979
AQQ52939.1
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.977
AQQ52940.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.970
AQQ52364.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.944
Your Current Organism:
Planococcus maritimus
NCBI taxonomy Id: 192421
Other names: DSM 17275, JCM 11543, KCCM 41587, P. maritimus, Planococcus maritimus Yoon et al. 2003 emend. Ivanova et al. 2006, Planococcus sp. KMM 3738, strain TF-9
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.