STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQQ54737.15-oxoprolinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (589 aa)    
Predicted Functional Partners:
AQQ54738.1
5-oxoprolinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
AQQ54739.1
Carbamoylsarcosine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.993
AQQ53069.1
Glutamate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.990
AQQ54521.1
Kinase inhibitor; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.967
AQQ54522.1
KipI antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.957
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
       0.945
AQQ54736.1
formyl-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.937
AQQ53300.1
Cysteine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.930
AQQ52612.1
Cysteine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.927
AQQ54986.1
Heat-shock protein HtpX; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.924
Your Current Organism:
Planococcus maritimus
NCBI taxonomy Id: 192421
Other names: DSM 17275, JCM 11543, KCCM 41587, P. maritimus, Planococcus maritimus Yoon et al. 2003 emend. Ivanova et al. 2006, Planococcus sp. KMM 3738, strain TF-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.