STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001922585_02103Unannotated protein. (346 aa)    
Predicted Functional Partners:
GCA_001922585_02954
Unannotated protein.
    
 0.847
GCA_001922585_03107
Unannotated protein.
     
 0.820
GCA_001922585_03360
Unannotated protein.
     
 0.745
GCA_001922585_00747
Unannotated protein.
 
   
 0.729
GCA_001922585_02790
Unannotated protein.
     
 0.721
GCA_001922585_02445
Unannotated protein.
     
 0.647
GCA_001922585_03408
Unannotated protein.
     
 0.647
GCA_001922585_00949
Unannotated protein.
    
 
 0.645
GCA_001922585_00094
Unannotated protein.
    
 
 0.633
GCA_001922585_01316
Unannotated protein.
     
 0.617
Your Current Organism:
Pantoea sp. 119
NCBI taxonomy Id: 1925589
Other names: P. sp. 1.19, Pantoea sp. 1.19, Pantoea sp. CNPSO2804
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.