STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001922585_02555Unannotated protein. (258 aa)    
Predicted Functional Partners:
GCA_001922585_02554
Unannotated protein.
       0.773
GCA_001922585_03373
Unannotated protein.
    
  0.647
GCA_001922585_01796
Unannotated protein.
  
     0.601
GCA_001922585_00653
Unannotated protein.
  
     0.578
GCA_001922585_01292
Unannotated protein.
  
     0.577
GCA_001922585_00652
Unannotated protein.
  
     0.554
GCA_001922585_02819
Unannotated protein.
  
     0.536
GCA_001922585_01899
Unannotated protein.
  
     0.529
GCA_001922585_01782
Unannotated protein.
  
     0.519
GCA_001922585_00247
Unannotated protein.
  
     0.508
Your Current Organism:
Pantoea sp. 119
NCBI taxonomy Id: 1925589
Other names: P. sp. 1.19, Pantoea sp. 1.19, Pantoea sp. CNPSO2804
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.