STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001936475_00972Unannotated protein. (190 aa)    
Predicted Functional Partners:
GCA_001936475_00534
Unannotated protein.
   
 
 0.990
GCA_001936475_00536
Unannotated protein.
   
 
 0.990
GCA_001936475_00973
Unannotated protein.
 
 
 0.990
GCA_001936475_01716
Unannotated protein.
   
 0.985
GCA_001936475_02286
Unannotated protein.
  
  
 0.982
GCA_001936475_00533
Unannotated protein.
   
 
  0.981
GCA_001936475_00532
Unannotated protein.
  
 
  0.979
GCA_001936475_02287
Unannotated protein.
     
 0.977
GCA_001936475_02636
Unannotated protein.
   
 
  0.948
GCA_001936475_00127
Unannotated protein.
 
 0.910
Your Current Organism:
Algoriphagus marinus
NCBI taxonomy Id: 1925762
Other names: Algoriphagus marinus Han et al. 2017, Algoriphagus sp. am2, KCTC 52549, MCCC 1H00178, strain am2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.