STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900156915_00659Unannotated protein. (376 aa)    
Predicted Functional Partners:
GCA_900156915_00879
Unannotated protein.
  
  
 0.774
GCA_900156915_00660
Unannotated protein.
       0.768
GCA_900156915_00817
Unannotated protein.
   
    0.724
GCA_900156915_00833
Unannotated protein.
   
    0.646
GCA_900156915_01563
Unannotated protein.
   
    0.646
GCA_900156915_00636
Unannotated protein.
  
    0.602
GCA_900156915_02570
Unannotated protein.
   
    0.598
GCA_900156915_00269
Unannotated protein.
  
  
 0.565
GCA_900156915_00883
Unannotated protein.
   
    0.527
GCA_900156915_00827
Unannotated protein.
  
    0.508
Your Current Organism:
Sediminibacillus massiliensis
NCBI taxonomy Id: 1926277
Other names: Aquibacillus sp. Marseille-P3518, CSUR P3518, S. massiliensis, strain Marseille-P3518
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.