STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900156915_02573Unannotated protein. (212 aa)    
Predicted Functional Partners:
GCA_900156915_02572
Unannotated protein.
 
 
   0.874
GCA_900156915_02574
Unannotated protein.
 
 
   0.845
GCA_900156915_00134
Unannotated protein.
  
     0.728
GCA_900156915_00527
Unannotated protein.
  
     0.566
GCA_900156915_02579
Unannotated protein.
 
     0.562
GCA_900156915_02571
Unannotated protein.
 
   
 0.560
GCA_900156915_02575
Unannotated protein.
       0.553
GCA_900156915_02577
Unannotated protein.
       0.531
GCA_900156915_02576
Unannotated protein.
       0.511
GCA_900156915_02195
Unannotated protein.
  
     0.489
Your Current Organism:
Sediminibacillus massiliensis
NCBI taxonomy Id: 1926277
Other names: Aquibacillus sp. Marseille-P3518, CSUR P3518, S. massiliensis, strain Marseille-P3518
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.