STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900156915_02799Unannotated protein. (325 aa)    
Predicted Functional Partners:
GCA_900156915_02800
Unannotated protein.
 
     0.686
GCA_900156915_02819
Unannotated protein.
  
     0.676
GCA_900156915_02827
Unannotated protein.
  
     0.655
GCA_900156915_00580
Unannotated protein.
  
     0.650
GCA_900156915_02807
Unannotated protein.
 
     0.629
GCA_900156915_02801
Unannotated protein.
       0.615
GCA_900156915_02802
Unannotated protein.
       0.599
GCA_900156915_02828
Unannotated protein.
  
     0.549
GCA_900156915_02806
Unannotated protein.
 
     0.524
GCA_900156915_02804
Unannotated protein.
 
     0.521
Your Current Organism:
Sediminibacillus massiliensis
NCBI taxonomy Id: 1926277
Other names: Aquibacillus sp. Marseille-P3518, CSUR P3518, S. massiliensis, strain Marseille-P3518
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.