STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900166635_03781Unannotated protein. (289 aa)    
Predicted Functional Partners:
GCA_900166635_03780
Unannotated protein.
 
     0.930
GCA_900166635_03779
Unannotated protein.
    
  0.888
GCA_900166635_03784
Unannotated protein.
 
  
 0.882
GCA_900166635_03782
Unannotated protein.
 
     0.825
GCA_900166635_01689
Unannotated protein.
  
 
  0.797
GCA_900166635_02919
Unannotated protein.
  
 
  0.782
GCA_900166635_00238
Unannotated protein.
  
 
  0.781
GCA_900166635_03731
Unannotated protein.
  
 
 
0.772
GCA_900166635_01825
Unannotated protein.
  
 
 0.769
GCA_900166635_02920
Unannotated protein.
  
 
 
0.763
Your Current Organism:
Oceanobacillus timonensis
NCBI taxonomy Id: 1926285
Other names: CSUR P3532, O. timonensis, Oceanobacillus sp. Marseille-P3532, strain Marseille-P3532
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.