STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900166625_03407Unannotated protein. (509 aa)    
Predicted Functional Partners:
GCA_900166625_02266
Unannotated protein.
     
 0.999
GCA_900166625_00623
Unannotated protein.
 
 0.992
GCA_900166625_03408
Unannotated protein.
 0.991
GCA_900166625_03409
Unannotated protein.
 0.991
GCA_900166625_03405
Unannotated protein.
 
 0.990
GCA_900166625_03406
Unannotated protein.
 
 
 0.983
GCA_900166625_01239
Unannotated protein.
 0.970
GCA_900166625_01240
Unannotated protein.
 0.968
GCA_900166625_02885
Unannotated protein.
 0.954
GCA_900166625_03188
Unannotated protein.
 0.952
Your Current Organism:
Halobacillus massiliensis
NCBI taxonomy Id: 1926286
Other names: CSUR P3554, H. massiliensis, Halobacillus sp. Marseille-P3554, P3554, strain Marseille-P3554
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.