STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW27633.1Putative tartrate dehydrogenase. (333 aa)    
Predicted Functional Partners:
GAW28889.1
3-isopropylmalate dehydratase large subunit.
 0.991
GAW28890.1
3-isopropylmalate dehydratase small subunit.
 
 0.980
GAW27632.1
Homocitrate synthase.
 0.953
GAW29042.1
Glutamate synthase subunit alpha.
  
 
 0.940
GAW28885.1
Acetolactate synthase small subunit.
  
 0.929
GAW29581.1
Aconitate hydratase.
 0.911
GAW28886.1
Ketol-acid reductoisomerase.
  
  
 0.865
GAW28883.1
Dihydroxy-acid dehydratase.
  
  
 0.858
GAW28683.1
succinyl-CoA synthetase subunit alpha.
 
 
 0.849
GAW29937.1
succinyl-CoA synthetase subunit alpha.
 
 
 0.849
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.