STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW27656.1Hypothetical protein. (434 aa)    
Predicted Functional Partners:
GAW27657.1
Hypothetical protein.
  
  
 0.915
GAW29095.1
Type IV pilus assembly protein PilB.
   
  
 0.869
GAW28040.1
Competence protein ComEA.
   
  
 0.818
GAW27658.1
MerR family transcriptional regulator.
  
    0.803
GAW29092.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
   
  
 0.803
GAW29093.1
Pilus assembly protein PilC.
   
  
 0.791
GAW28041.1
Competence protein ComEC.
   
  
 0.695
GAW30002.1
Primosomal protein DnaI.
  
     0.661
GAW27661.1
Flagellar hook-associated protein FlgK.
 
     0.624
GAW27662.1
Flagellar hook-associated protein FlgL.
 
     0.612
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.