STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW27706.1Hypothetical protein. (445 aa)    
Predicted Functional Partners:
GAW27635.1
Hypothetical protein.
   
 0.979
GAW28323.1
Glutaredoxin.
   
 0.979
GAW28355.1
Hypothetical protein.
 
   
  0.920
GAW29853.1
Ribose-phosphate pyrophosphokinase.
   
 0.920
GAW28539.1
NADH dehydrogenase.
   
 0.919
GAW28780.1
NADH dehydrogenase.
   
 0.919
GAW27833.1
Hypothetical protein.
  
 
 0.895
GAW27838.1
Glycine cleavage system H protein.
    
 0.893
GAW29029.1
MBL fold metallo-hydrolase.
 
      0.892
GAW29737.1
Prephenate dehydratase.
    
 0.864
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.