STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW27877.1mRNA interferase MazF. (122 aa)    
Predicted Functional Partners:
GAW28497.1
CopG family transcriptional regulator.
  
 
 0.919
GAW27874.1
Transcriptional regulator, ArgR family.
 
     0.811
GAW27875.1
rRNA methyltransferase.
 
     0.802
GAW27876.1
NAD(+) kinase.
  
    0.775
GAW29213.1
Hypothetical protein.
  
     0.771
GAW27873.1
DNA repair protein RecN.
       0.757
GAW27514.1
Hypothetical protein.
  
     0.630
GAW28989.1
AbrB family transcriptional regulator.
 
  
 0.625
GAW27872.1
Spore cortex-lytic enzyme.
       0.561
GAW27878.1
(Fe-S)-binding protein.
       0.547
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.