STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW27944.1Long chain fatty acid acyl-coa ligase. (554 aa)    
Predicted Functional Partners:
GAW27576.1
50S ribosomal protein L6.
    
  0.974
GAW28406.1
Acyl carrier protein.
  
 0.935
GAW28340.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.922
GAW28088.1
3-phosphoshikimate 1-carboxyvinyltransferase.
 
   
  0.915
GAW28694.1
Phosphoesterase PA-phosphatase-like protein.
    
 0.896
GAW27943.1
acyl-CoA dehydrogenase.
 
 
 0.889
GAW27564.1
50S ribosomal protein L2.
   
 
 0.887
GAW28539.1
NADH dehydrogenase.
   
 
 0.885
GAW28780.1
NADH dehydrogenase.
   
 
 0.885
GAW27591.1
50S ribosomal protein L13.
    
 
 0.882
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.