STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW27975.1Site-specific tyrosine recombinase XerD. (316 aa)    
Predicted Functional Partners:
GAW28310.1
ATP-dependent protease subunit HslV.
  
  
 0.750
GAW29221.1
Holliday junction DNA helicase RuvB.
 
 
 0.720
GAW29222.1
Holliday junction ATP-dependent DNA helicase RuvA.
  
 
 0.681
GAW29292.1
Excinuclease ABC subunit B.
 
  
 0.675
GAW27657.1
Hypothetical protein.
   
    0.671
GAW29291.1
Excinuclease ABC subunit A.
    
 0.641
GAW27813.1
N-6 DNA methylase.
    
 0.634
GAW28225.1
DNA translocase FtsK.
  
   
 0.630
GAW29223.1
Crossover junction endodeoxyribonuclease RuvC.
     
 0.629
GAW29072.1
DNA translocase FtsK.
  
   
 0.625
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.