STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW28042.1DNA polymerase III subunit delta. (335 aa)    
Predicted Functional Partners:
GAW30214.1
DNA polymerase III subunit beta.
  
 
 0.996
GAW28994.1
DNA polymerase III subunit delta'.
 
 
 0.995
GAW29369.1
DNA polymerase III subunit gamma/tau.
 
 
 0.994
GAW28696.1
DNA polymerase III subunit alpha.
  
 0.990
GAW30018.1
Hypothetical protein.
   
 0.982
GAW28041.1
Competence protein ComEC.
 
   
 0.931
GAW28040.1
Competence protein ComEA.
       0.807
GAW29347.1
DNA polymerase IV.
    
 0.798
GAW27967.1
Repressor LexA.
    
  0.780
GAW27524.1
Replicative DNA helicase.
    
 0.719
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.