STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW28104.1Hypothetical protein. (113 aa)    
Predicted Functional Partners:
GAW28103.1
Dihydroxyacetone kinase.
 
  
 0.983
GAW28102.1
Hypothetical protein.
 
    0.882
GAW28101.1
ATP-dependent DNA helicase RecG.
       0.730
GAW29801.1
DNA-binding protein WhiA.
  
     0.570
GAW27818.1
Hypothetical protein.
  
    0.563
GAW27743.1
Fatty acid-binding protein DegV.
 
    0.562
GAW28105.1
Disulfide oxidoreductase.
       0.562
GAW29702.1
DNA-binding protein.
 
     0.511
GAW28106.1
50S ribosomal protein L28.
       0.494
GAW29859.1
LacI family transcriptional regulator.
  
    0.403
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.