STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW28108.1Hypothetical protein. (186 aa)    
Predicted Functional Partners:
GAW28107.1
Molecular chaperone Hsp33.
       0.762
GAW28652.1
Non-canonical purine NTP pyrophosphatase.
  
    0.687
GAW28109.1
Hypothetical protein.
       0.554
GAW28111.1
Bifunctional non-homologous end joining protein LigD.
   
 
 0.480
GAW28112.1
DNA polymerase.
     
 0.451
GAW30063.1
Polynucleotide adenylyltransferase.
  
 
 0.406
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.