STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW28143.1Sigma-54-dependent Fis family transcriptional regulator. (442 aa)    
Predicted Functional Partners:
GAW28144.1
Two-component sensor histidine kinase.
 
 0.971
GAW28289.1
Flagellar motor switch phosphatase FliY.
  
 
 0.950
GAW28118.1
PAS domain-containing sensor histidine kinase.
 0.916
GAW28766.1
Methyl-accepting chemotaxis sensory transducer.
  
 0.915
GAW29343.1
Hypothetical protein.
  
 0.897
GAW29393.1
Signal transduction histidine kinase, nitrogen specific, NtrB.
 0.895
GAW28195.1
Hypothetical protein.
 0.837
GAW29804.1
RNA polymerase sigma-54 factor.
 
  
 0.818
GAW28014.1
Protein of unknown function DUF4372.
  
 0.797
GAW29303.1
Sporulation protein.
 
  
  0.762
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.