STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW28220.1ABC transporter permease. (292 aa)    
Predicted Functional Partners:
GAW28222.1
ABC transporter ATPase.
 
 0.993
GAW28221.1
ABC transporter permease.
 
 
0.983
GAW27554.1
Heme ABC transporter ATP-binding protein.
 
 0.970
GAW28223.1
BMP family ABC transporter substrate-binding protein.
 
 
 0.968
GAW27553.1
ABC transporter permease.
 
0.962
GAW27555.1
Purine-binding protein BAB2_0673.
 
 
 0.861
GAW30091.1
D-ribose transporter ATP-binding protein.
  
  0.685
GAW28219.1
Biotin synthase BioB.
       0.508
GAW28224.1
Transcriptional regulator.
  
    0.468
GAW29436.1
Hypothetical protein.
   
 
  0.401
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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