STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW28663.1Spore germination protein. (470 aa)    
Predicted Functional Partners:
GAW28662.1
Germination protein.
  
 0.955
GAW27824.1
Spore germination protein.
 
  
 0.808
GAW27823.1
Hypothetical protein.
  
 0.807
GAW29573.1
Hypothetical protein.
  
 0.798
GAW28051.1
Hypothetical protein.
 
  
 0.792
GAW30083.1
Stage V sporulation protein AD.
  
  
 0.789
GAW30084.1
Stage V sporulation protein AC.
  
    0.783
GAW29889.1
GPR endopeptidase.
  
    0.780
GAW27636.1
Stage II sporulation protein R.
 
    0.779
GAW30082.1
Stage V sporulation protein AE.
  
    0.776
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.