STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW28711.1DNA polymerase I. (842 aa)    
Predicted Functional Partners:
GAW27697.1
Hypothetical protein.
   
 0.999
GAW27698.1
Hypothetical protein.
  
 0.999
GAW27700.1
ATPase.
  
 0.999
GAW27957.1
DNA mismatch repair protein MutS.
   
 0.999
GAW28758.1
DNA sulfur modification protein DndD.
  
 0.999
GAW29373.1
Helicase.
  
 0.999
GAW30214.1
DNA polymerase III subunit beta.
 
 0.999
GAW27958.1
Hypothetical protein.
   
 0.998
GAW29631.1
DNA recombination/repair protein RecA.
 
 0.998
GAW29570.1
Histidinol-phosphatase.
   
 0.997
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.