STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW28728.1Two-component sensor histidine kinase. (493 aa)    
Predicted Functional Partners:
GAW28129.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 0.990
GAW29164.1
DNA-binding response regulator.
 0.990
GAW28727.1
DNA-binding response regulator.
 0.981
GAW27965.1
Response regulator receiver modulated diguanylate cyclase.
  
 0.958
GAW29200.1
Two-component system response regulator.
 0.956
GAW29980.1
Chemotaxis protein CheR.
 
 
  0.919
GAW28766.1
Methyl-accepting chemotaxis sensory transducer.
   
 0.893
GAW29343.1
Hypothetical protein.
   
 0.855
GAW29867.1
Response regulator.
  
  
 0.814
GAW28288.1
Response regulator.
  
  0.783
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.