STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW28729.1Spore coat protein S. (347 aa)    
Predicted Functional Partners:
GAW28730.1
Hypothetical protein.
 
    
0.822
GAW28731.1
Phosphodiesterase.
       0.773
GAW28870.1
Transposase.
  
     0.618
GAW27887.1
Transposase.
  
     0.608
GAW27601.1
Small acid-soluble spore protein alpha/beta type.
  
    0.583
GAW28727.1
DNA-binding response regulator.
       0.576
GAW28728.1
Two-component sensor histidine kinase.
       0.576
GAW28732.1
Spermidine synthase.
       0.561
GAW28733.1
Agmatinase.
       0.554
GAW28659.1
Lon-like ATP-dependent protease.
  
     0.540
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.