STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW28962.1Hypothetical protein. (113 aa)    
Predicted Functional Partners:
GAW28960.1
Hypothetical protein.
       0.773
GAW28961.1
Hypothetical protein.
       0.773
GAW28959.1
Transcriptional regulator.
       0.741
GAW28963.1
Transcriptional regulator.
       0.563
GAW28964.1
Hypothetical protein.
       0.541
GAW28965.1
Hypothetical protein.
       0.541
GAW28957.1
Hypothetical protein.
       0.513
GAW28958.1
Helix-turn-helix domain protein.
       0.513
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.