STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW28993.1Stage 0 sporulation protein. (271 aa)    
Predicted Functional Partners:
GAW28996.1
dTMP kinase.
 
    0.936
GAW28994.1
DNA polymerase III subunit delta'.
 
   0.929
GAW28990.1
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.
 
    0.889
GAW29629.1
Ribonuclease Y.
 
  
 0.862
GAW28992.1
Protein of unknown function DUF972.
 
    0.858
GAW28991.1
Hypothetical protein.
 
    0.843
GAW28995.1
Hypothetical protein.
  
  
 0.829
GAW28997.1
Hypothetical protein.
  
    0.777
GAW29367.1
Recombination protein RecR.
      0.757
GAW28297.1
Flagellar basal body rod modification protein FlgD.
    
   0.669
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.