STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW29026.1PpiC-type peptidyl-prolyl cis-trans isomerase. (187 aa)    
Predicted Functional Partners:
GAW28711.1
DNA polymerase I.
  
 
 0.672
GAW29907.1
Hypothetical protein.
  
 
 0.622
GAW29028.1
NAD(P)H-nitrite reductase.
  
  
 0.616
GAW29027.1
Rubredoxin.
       0.608
GAW29054.1
Osmotically inducible protein.
  
   
 0.589
GAW29610.1
IMP dehydrogenase.
  
 
 0.541
GAW29029.1
MBL fold metallo-hydrolase.
       0.518
GAW28386.1
Thioredoxin-disulfide reductase.
  
 
 
 0.492
GAW29025.1
O-acetylhomoserine aminocarboxypropyltransferase.
  
    0.431
GAW28658.1
Ferredoxin.
  
     0.430
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.