STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW29096.1Hypothetical protein. (185 aa)    
Predicted Functional Partners:
GAW28059.1
Molecular chaperone DnaJ.
  
 
 0.929
GAW28419.1
RNA polymerase sigma factor RpoD.
  
 
 0.898
GAW28913.1
DNA-directed RNA polymerase subunit beta.
    
 
 0.891
GAW27588.1
DNA-directed RNA polymerase subunit alpha.
   
 
 0.884
GAW29343.1
Hypothetical protein.
   
 0.884
GAW28912.1
DNA-directed RNA polymerase subunit beta'.
    
   0.878
GAW30115.1
DNA-directed RNA polymerase subunit omega.
    
   0.878
GAW28014.1
Protein of unknown function DUF4372.
   
 0.851
GAW28994.1
DNA polymerase III subunit delta'.
    
  0.819
GAW29369.1
DNA polymerase III subunit gamma/tau.
    
  0.819
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.