STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW29130.1NapC/NirT cytochrome c domain protein. (144 aa)    
Predicted Functional Partners:
GAW29129.1
Cytochrome c552.
 
 0.988
GAW28595.1
Cytochrome c552.
 
 0.951
GAW28604.1
Nitrate reductase catalytic subunit.
  
  0.804
GAW28602.1
Ferredoxin-type protein NapG.
 
 
 0.770
GAW29952.1
Cytochrome c-type protein.
  
  
 
0.716
GAW28530.1
Hypothetical protein.
 
 
 0.675
GAW28376.1
Hypothetical protein.
  
 
  0.658
GAW28515.1
Nitrogenase iron protein.
     
 0.648
GAW28539.1
NADH dehydrogenase.
   
 
  0.639
GAW28780.1
NADH dehydrogenase.
   
 
  0.639
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.