STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW29166.1Hypothetical protein. (471 aa)    
Predicted Functional Partners:
GAW29167.1
Hypothetical protein.
 
 
 0.997
GAW29168.1
Uroporphyrinogen decarboxylase.
 
 0.997
GAW30134.1
Hypothetical protein.
  
 
 0.870
GAW29975.1
uroporphyrin-III C-methyltransferase.
  
 
 0.774
GAW28054.1
Coproporphyrinogen III oxidase.
    
 0.753
GAW29165.1
Hypothetical protein.
       0.723
GAW27657.1
Hypothetical protein.
  
    0.713
GAW28000.1
UDP-glucose 4-epimerase GalE.
    
  0.609
GAW28842.1
Coproporphyrinogen III oxidase, anaerobic.
    
 0.603
GAW29669.1
Magnesium chelatase.
     
 0.586
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.