STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW29167.1Hypothetical protein. (306 aa)    
Predicted Functional Partners:
GAW29166.1
Hypothetical protein.
 
 
 0.997
GAW29168.1
Uroporphyrinogen decarboxylase.
 
  
 0.991
GAW30134.1
Hypothetical protein.
  
  
 0.802
GAW29977.1
Heme d1 biosynthesis radical SAM protein NirJ2.
   
 
 0.762
GAW29165.1
Hypothetical protein.
       0.723
GAW29975.1
uroporphyrin-III C-methyltransferase.
  
  
 0.723
GAW29399.1
Tungsten cofactor oxidoreductase radical SAM maturase.
   
 
 0.663
GAW29220.1
Hypothetical protein.
     
 0.629
GAW29408.1
protein-(glutamine-N5) methyltransferase, release factor-specific.
     
 0.627
GAW29974.1
Hydroxymethylbilane synthase.
 
  
 0.621
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.