STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW29177.1Serine dehydratase. (143 aa)    
Predicted Functional Partners:
GAW30154.1
L-serine dehydratase, iron-sulfur-dependent subunit alpha.
 
 0.989
GAW30234.1
Serine dehydratase.
 
 0.989
GAW30037.1
Serine dehydratase.
 
 0.980
GAW29412.1
Serine hydroxymethyltransferase.
  
 
 0.807
GAW28705.1
Pyruvate kinase.
   
 
 0.743
GAW28885.1
Acetolactate synthase small subunit.
  
 
  0.702
GAW27621.1
Threonine synthase.
   
 
  0.693
GAW29858.1
Threonine ammonia-lyase.
  
 
 0.639
GAW29753.1
Homoserine kinase.
   
 
 0.611
GAW29754.1
Homoserine dehydrogenase.
   
 
  0.604
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.