STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW29242.1Hypothetical protein. (326 aa)    
Predicted Functional Partners:
GAW28705.1
Pyruvate kinase.
   
  0.769
GAW29240.1
Endonuclease MutS2.
       0.543
GAW29241.1
Peptidase U32.
  
    0.530
GAW29243.1
Transposase.
       0.501
GAW29244.1
Hypothetical protein.
       0.501
GAW28416.1
SAM-dependent methyltransferase.
  
  
 0.449
GAW28082.1
Iron transporter.
  
     0.443
GAW29324.1
Carbohydrate-binding protein.
  
     0.431
GAW28056.1
Chaperonin.
  
     0.416
GAW29245.1
Resolvase domain.
       0.408
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.