STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW29275.1Phosphonate ABC transporter, permease protein PhnE. (282 aa)    
Predicted Functional Partners:
GAW29273.1
Hypothetical protein.
 
 0.997
GAW29274.1
Hypothetical protein.
 
 0.993
GAW27803.1
Phosphate ABC transporter substrate-binding protein, PhoT family.
   
 
 0.861
GAW27686.1
ABC transporter substrate-binding protein.
     
 0.851
GAW27795.1
Hypothetical protein.
   
 
  0.841
GAW29294.1
ABC-type sugar transport system, periplasmic component.
   
 
  0.829
GAW29437.1
Sugar ABC transporter permease.
     
 0.810
GAW29792.1
ABC transporter permease.
     
 0.810
GAW29436.1
Hypothetical protein.
     
 0.798
GAW29791.1
ABC transporter permease.
     
 0.798
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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