STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW29299.1ABC transporter permease. (295 aa)    
Predicted Functional Partners:
GAW29300.1
Cell division ATP-binding protein FtsE.
 0.999
GAW29298.1
Peptidase M23.
 
  
 0.967
GAW28785.1
Cell division protein FtsZ.
   
 
 0.765
GAW29982.1
Cell division protein FtsA.
  
 0.742
GAW28787.1
Polypeptide-transport-associated domain-containing protein FtsQ-type.
    
 0.724
GAW28639.1
Hypothetical protein.
  
 0.680
GAW28797.1
Stage V sporulation protein D.
    
 0.667
GAW29297.1
Peptidase S41.
 
     0.647
GAW28122.1
Septum formation initiator.
  
  
 0.640
GAW27465.1
Hypothetical protein.
   
 
 0.629
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.