STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW29316.1Glutamine ABC transporter permease. (227 aa)    
Predicted Functional Partners:
GAW29315.1
Phosphonate-transporting ATPase.
 0.999
GAW29317.1
Extracellular solute-binding protein family 3.
 0.999
GAW29548.1
Amino acid ABC transporter ATPase.
 0.999
GAW29549.1
Glutamine ABC transporter substrate-binding protein.
 0.997
GAW28504.1
ABC transporter.
 
 
 
  0.990
GAW27795.1
Hypothetical protein.
 
 
 
  0.959
GAW29551.1
Glutamine abc transporter, glutamine-binding protein, putative.
  
  
 
0.928
GAW29550.1
Glutamine ABC transporter permease.
  
  
 
0.927
GAW29463.1
ABC transporter.
    
  0.926
GAW27686.1
ABC transporter substrate-binding protein.
   
 
 0.925
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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