STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW29364.1ABC transporter permease. (252 aa)    
Predicted Functional Partners:
GAW29365.1
NitT/TauT family transport system ATP-binding protein.
 
 0.998
GAW29363.1
Aliphatic sulfonates family ABC transporter substrate-binding protein.
 
 0.997
GAW28669.1
Hypothetical protein.
  
 
 0.949
GAW30107.1
Hypothetical protein.
    
 0.902
GAW27795.1
Hypothetical protein.
  
  0.859
GAW27686.1
ABC transporter substrate-binding protein.
   
 
 0.837
GAW29294.1
ABC-type sugar transport system, periplasmic component.
    
  0.824
GAW27840.1
Hypothetical protein.
 
  
  0.761
GAW28721.1
ABC transporter ATP-binding protein.
 
   
  0.748
GAW27688.1
Peptide ABC transporter permease.
     
 0.746
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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