STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW29434.1LacI family transcriptional regulator. (336 aa)    
Predicted Functional Partners:
GAW29042.1
Glutamate synthase subunit alpha.
    
 
 0.929
GAW28705.1
Pyruvate kinase.
    
 
 0.918
GAW28182.1
Phosphocarrier protein.
   
 
 0.888
GAW29232.1
Serine kinase.
   
 
 0.888
GAW29785.1
Hypothetical protein.
   
 
 0.888
GAW29610.1
IMP dehydrogenase.
    
 
 0.882
GAW27430.1
Glutamine-hydrolyzing GMP synthase.
    
   0.877
GAW30099.1
3,4-dihydroxy-2-butanone-4-phosphate synthase.
    
   0.877
GAW29440.1
Fructokinase.
 
 
 0.768
GAW29435.1
ABC transporter substrate-binding protein.
 
 
 0.763
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.