STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW29589.1Peptidoglycan-binding protein LysM. (89 aa)    
Predicted Functional Partners:
GAW27990.1
Phage tail sheath protein.
 
 
 0.974
GAW28517.1
Hypothetical protein.
 
   0.836
GAW30171.1
Hypothetical protein.
 
   0.836
GAW28516.1
Hypothetical protein.
 
   0.810
GAW29174.1
Hypothetical protein.
 
   0.778
GAW29593.1
Hypothetical protein.
 
   0.762
GAW28189.1
Hypothetical protein.
  
   0.754
GAW28970.1
Hypothetical protein.
  
   0.754
GAW29586.1
Hypothetical protein.
  
   0.754
GAW27430.1
Glutamine-hydrolyzing GMP synthase.
    
  0.723
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.