STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW29705.1DNA-binding response regulator. (252 aa)    
Predicted Functional Partners:
GAW29706.1
Sensor histidine kinase.
 0.985
GAW28928.1
Sensor histidine kinase.
 0.939
GAW29690.1
Histidine kinase.
 0.909
GAW29945.1
Hypothetical protein.
    
 0.669
GAW29704.1
Carbon starvation protein A.
 
     0.617
GAW29122.1
Hypothetical protein.
  
 
 0.581
GAW29926.1
Hypothetical protein.
  
 
 0.581
GAW29707.1
Hypothetical protein.
       0.486
GAW29703.1
Hypothetical protein.
       0.464
GAW28026.1
Gamma-glutamyl-phosphate reductase.
    
   0.451
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.