STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW29722.1Hypothetical protein. (285 aa)    
Predicted Functional Partners:
GAW29723.1
Aminofutalosine synthase MqnE.
 
  
 0.988
GAW29721.1
Dehypoxanthine futalosine cyclase.
 
  
 0.972
GAW29725.1
4-hydroxybenzoate octaprenyltransferase.
 
   
 0.958
GAW29724.1
Aromatic acid decarboxylase.
 
   
 0.900
GAW29726.1
Menaquinone biosynthesis decarboxylase.
 
   
 0.890
GAW29737.1
Prephenate dehydratase.
    
  0.794
GAW29727.1
Hypothetical protein.
     
 0.781
GAW29084.1
Chorismate synthase.
    
  0.756
GAW28099.1
Glutamine amidotransferase.
    
  0.745
GAW29720.1
Preprotein translocase.
       0.732
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.