STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW29768.1Isopentenyl-diphosphate delta-isomerase. (356 aa)    
Predicted Functional Partners:
GAW28083.1
Hypothetical protein.
  
 
 0.873
GAW27430.1
Glutamine-hydrolyzing GMP synthase.
  
 
 0.871
GAW27720.1
Fe-S oxidoreductase.
  
 0.841
GAW30195.1
Heterodisulfide reductase.
  
 0.841
GAW28705.1
Pyruvate kinase.
   
 0.798
GAW29610.1
IMP dehydrogenase.
   
 
 0.781
GAW29767.1
Hypothetical protein.
       0.773
GAW29769.1
NUDIX hydrolase.
       0.773
GAW28398.1
Lactate permease.
  
  
 0.750
GAW28208.1
ADP-ribose pyrophosphatase.
   
 
  0.683
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.