STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW29803.1Acetyltransferase. (161 aa)    
Predicted Functional Partners:
GAW29801.1
DNA-binding protein WhiA.
       0.784
GAW29802.1
MBL fold metallo-hydrolase.
       0.777
GAW28903.1
Polyprenyl glycosylphosphotransferase.
  
  
 0.722
GAW29474.1
Undecaprenyl-phosphate glucose phosphotransferase.
  
  
 0.722
GAW27674.1
Polysaccharide biosynthesis protein.
  
 
 0.710
GAW29804.1
RNA polymerase sigma-54 factor.
       0.584
GAW27672.1
UDP-N-acetyl glucosamine 2-epimerase.
  
 
 0.579
GAW29416.1
UDP-N-acetyl glucosamine 2-epimerase.
  
 
 0.579
GAW28117.1
Cysteine synthase A.
    
 0.560
GAW29800.1
Sporulation lipoprotein, YhcN/YlaJ family.
       0.556
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.