STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW29866.1Histidine kinase. (359 aa)    
Predicted Functional Partners:
GAW29758.1
GGDEF domain-containing protein.
 
 0.814
GAW27756.1
GGDEF domain-containing protein.
 
  0.800
GAW27653.1
GGDEF domain-containing protein.
 0.798
GAW29865.1
Chemotaxis protein CheX.
 
     0.787
GAW29311.1
HDIG domain-containing protein.
  
     0.774
GAW29867.1
Response regulator.
       0.768
GAW29869.1
Chemotaxis protein CheX.
  
   0.734
GAW29868.1
Chemotaxis protein CheD.
  
    0.731
GAW29871.1
Chemotaxis protein CheW.
  
   0.711
GAW27655.1
Diguanylate cyclase.
 
  0.700
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.